diff --git a/src/bin/App.class b/src/bin/App.class
new file mode 100644
index 0000000..d0657de
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diff --git a/src/bin/gui/Board$1.class b/src/bin/gui/Board$1.class
new file mode 100644
index 0000000..b11d5a1
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diff --git a/src/bin/gui/Board$2.class b/src/bin/gui/Board$2.class
new file mode 100644
index 0000000..b263b62
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diff --git a/src/bin/gui/Board.class b/src/bin/gui/Board.class
new file mode 100644
index 0000000..94b6029
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diff --git a/src/bin/gui/CellGUI.class b/src/bin/gui/CellGUI.class
new file mode 100644
index 0000000..d6c250a
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diff --git a/src/bin/gui/ComboBox.class b/src/bin/gui/ComboBox.class
new file mode 100644
index 0000000..b0e01ce
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diff --git a/src/bin/gui/FileChooser$Filter.class b/src/bin/gui/FileChooser$Filter.class
new file mode 100644
index 0000000..3d83038
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diff --git a/src/bin/gui/FileChooser.class b/src/bin/gui/FileChooser.class
new file mode 100644
index 0000000..941d85f
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diff --git a/src/bin/gui/Label.class b/src/bin/gui/Label.class
new file mode 100644
index 0000000..6787e31
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diff --git a/src/bin/gui/Nav.class b/src/bin/gui/Nav.class
new file mode 100644
index 0000000..8ed673a
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diff --git a/src/bin/gui/Root.class b/src/bin/gui/Root.class
new file mode 100644
index 0000000..d827603
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diff --git a/src/bin/gui/backend/Cell$List$Value.class b/src/bin/gui/backend/Cell$List$Value.class
new file mode 100644
index 0000000..2ffe7e9
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diff --git a/src/bin/gui/backend/Cell$List.class b/src/bin/gui/backend/Cell$List.class
new file mode 100644
index 0000000..820c9d6
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diff --git a/src/bin/gui/backend/Cell.class b/src/bin/gui/backend/Cell.class
new file mode 100644
index 0000000..82a77d7
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diff --git a/src/bin/gui/backend/Settings.class b/src/bin/gui/backend/Settings.class
new file mode 100644
index 0000000..1a8bf5f
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diff --git a/src/bin/gui/backend/SudokuChecker.class b/src/bin/gui/backend/SudokuChecker.class
new file mode 100644
index 0000000..b15e4cc
Binary files /dev/null and b/src/bin/gui/backend/SudokuChecker.class differ
diff --git a/src/bin/gui/backend/Theme.class b/src/bin/gui/backend/Theme.class
new file mode 100644
index 0000000..e137ef8
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diff --git a/src/run.ps1 b/src/run.ps1
index f1f6007..96c3ae1 100644
--- a/src/run.ps1
+++ b/src/run.ps1
@@ -2,15 +2,12 @@ function Run {
     param(
         [string]$flag
     )
-    javac *.java
-    java App $flag
-    Remove-Item *.class
-    Remove-Item gui/*.class
-    Remove-Item gui/backend/*.class
+    javac -d bin *.java
+    java -cp bin App $flag
 }
 
 if ($args.Length -eq 1) {
     $flag = $args[0]
 }
 
-Run $flag
\ No newline at end of file
+Run $flag
diff --git a/src/run.sh b/src/run.sh
old mode 100644
new mode 100755
index 70f0d5b..bb3119f
--- a/src/run.sh
+++ b/src/run.sh
@@ -1,13 +1,32 @@
-run() {
-    javac *.java
-    java App $1
-    rm *.class
-    rm gui/*.class
-    rm gui/backend/*.class
+function run() {
+    if [[ $# -eq 0 ]]; then
+        # Compile the program
+        javac -d bin *.java
+        java -cp bin App
+    else
+        case $1 in
+            "-c" | "--cli")
+                # Run the program in the CLI
+                # Compile the program
+                javac -d bin *.java
+                java -cp bin App -c
+                ;;
+
+            "-b" | "--build")
+                # Compile the program
+                javac -d bin *.java
+                ;;
+
+            "-j" | "--jar")
+                # Create a JAR file
+                jar cfe sudoku.jar App -C bin .
+                ;;
+
+            *)
+                echo "Invalid argument"
+                ;;
+        esac
+    fi
 }
 
-if($# -eq 1) then
-    FLAG=$1
-fi
-
-run $FLAG
\ No newline at end of file
+run $@
diff --git a/src/sudoku.jar b/src/sudoku.jar
new file mode 100644
index 0000000..9100b81
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